About UAAPRD
Protein resource database comprising of data on modeled proteins of A. aegypti
Sequence and structural information of all modeled proteins available with model validation studies for easy download
Probable druggable binding sites for all predicted proteins allows easy use for docking studies
Functional information of proteins is available for better understanding
Statistics
Number of Proteins
Number ofGenes
Based on our study number Of proteins modeled
Number of proteins in UAAPRD
Data
Contact Us
Our Address
Dr. Vidya Niranjan RV College of Engineering Bangalore-560059
Email Us
vidya.n@rvce.edu.in
Call Us
+91 9945465657
References
- UniProt: a hub for protein information. Nucleic acids research, 43(D1), D204-D212.
- Wang, S., Li, W., Liu, S., & Xu, J. (2016). RaptorX-Property: a web server for protein structure property prediction. Nucleic acids research, 44(W1), W430-W435.
- Kozlovskii, I., & Popov. P(2020) Spatiotemporal identification of druggable binding sites using deep learning. Communications biology, 3(1), 1-12.
- Laskowski, R. A., MacArthur, M. W., Moss, D. S., & Thornton, J. M. (1993).PROCHECK: a program to check the stereochemical quality of protein structures. Journal of applied crystallography, 26(2), 283-291.
- Kumar S, Stecher G, Li M, Knyaz C, Tamura K. MEGA X: molecular evolutionary genetics analysis across computing platforms. Molecular biology and evolution. 2018 Jun;35(6):1547.
- Johnson M, Zaretskaya I, Raytselis Y, Merezhuk Y, McGinnis S, Madden TL. NCBI BLAST: a better web interface. Nucleic acids research. 2008 Apr 24;36(suppl_2):W5-9.
- Dixon SL, Smondyrev AM, Rao SN. PHASE: a novel approach to pharmacophore modeling and 3D database searching. Chemical biology & drug design. 2006 May;67(5):370-2.